Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm12887B1AVM1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Gm12887B1AVM1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Mir1668-201ENSMUST00000184114 107 ntBASIC12.33□□□□□ -0.44
Gm12887B1AVM1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.33□□□□□ -0.44
Gm12887B1AVM1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm12887B1AVM1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms