Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.23□□□□□ -0.45
Chd6A3KFM7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.23□□□□□ -0.45
Chd6A3KFM7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.23□□□□□ -0.45
Chd6A3KFM7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Gm22018-201ENSMUST00000104357 131 ntBASIC12.23□□□□□ -0.45
Chd6A3KFM7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.23□□□□□ -0.45
Chd6A3KFM7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.23□□□□□ -0.45
Chd6A3KFM7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chd6A3KFM7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.22□□□□□ -0.45
Chd6A3KFM7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.22□□□□□ -0.45
Chd6A3KFM7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.22□□□□□ -0.45
Chd6A3KFM7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Gm46209-201ENSMUST00000217912 553 ntBASIC12.22□□□□□ -0.45
Chd6A3KFM7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.22□□□□□ -0.45
Chd6A3KFM7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Gm5370-201ENSMUST00000187187 574 ntBASIC12.22□□□□□ -0.45
Chd6A3KFM7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.22□□□□□ -0.45
Chd6A3KFM7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chd6A3KFM7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Gm24543-201ENSMUST00000103867 82 ntBASIC12.21□□□□□ -0.45
Chd6A3KFM7 Mir877-201ENSMUST00000104738 85 ntBASIC12.21□□□□□ -0.45
Chd6A3KFM7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.21□□□□□ -0.45
Chd6A3KFM7 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.21□□□□□ -0.45
Chd6A3KFM7 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.21□□□□□ -0.45
Chd6A3KFM7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.21□□□□□ -0.45
Chd6A3KFM7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Chd6A3KFM7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Gm43947-201ENSMUST00000203019 959 ntBASIC12.21□□□□□ -0.46
Chd6A3KFM7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chd6A3KFM7 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms