Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm27486-201ENSMUST00000184923 80 ntBASIC7.89□□□□□ -1.15
Ubr4A2AN08 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Gm18307-201ENSMUST00000206864 949 ntBASIC7.89□□□□□ -1.15
Ubr4A2AN08 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Gm10752-201ENSMUST00000218348 729 ntBASIC7.89□□□□□ -1.15
Ubr4A2AN08 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 AC140375.1-201ENSMUST00000225421 694 ntBASIC7.89□□□□□ -1.15
Ubr4A2AN08 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Mir7654-201ENSMUST00000185082 70 ntBASIC7.89□□□□□ -1.15
Ubr4A2AN08 AC154846.1-201ENSMUST00000226278 862 ntBASIC7.89□□□□□ -1.15
Ubr4A2AN08 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ubr4A2AN08 Dmtn-207ENSMUST00000228001 2437 ntBASIC7.89□□□□□ -1.15
Ubr4A2AN08 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm9368-201ENSMUST00000219348 831 ntBASIC7.88□□□□□ -1.15
Ubr4A2AN08 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Trav13-3-201ENSMUST00000117226 336 ntBASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm14665-201ENSMUST00000122294 557 ntBASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 AC133598.1-201ENSMUST00000224327 660 ntBASIC7.88□□□□□ -1.15
Ubr4A2AN08 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm18584-201ENSMUST00000203098 964 ntBASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC7.88□□□□□ -1.15
Ubr4A2AN08 AC154680.1-201ENSMUST00000224376 859 ntBASIC7.88□□□□□ -1.15
Ubr4A2AN08 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Gm6756-201ENSMUST00000180647 1620 ntBASIC7.88□□□□□ -1.15
Ubr4A2AN08 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ubr4A2AN08 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ubr4A2AN08 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC7.87□□□□□ -1.15
Ubr4A2AN08 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC7.87□□□□□ -1.15
Ubr4A2AN08 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC7.87□□□□□ -1.15
Ubr4A2AN08 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC7.87□□□□□ -1.15
Ubr4A2AN08 Gm20426-201ENSMUST00000173657 440 ntBASIC7.87□□□□□ -1.15
Ubr4A2AN08 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ubr4A2AN08 Gm29396-201ENSMUST00000185659 716 ntBASIC7.87□□□□□ -1.15
Ubr4A2AN08 Gm9540-201ENSMUST00000188230 478 ntBASIC7.87□□□□□ -1.15
Ubr4A2AN08 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ubr4A2AN08 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms