Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav12-1A0N8R1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12-1A0N8R1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav12-1A0N8R1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav12-1A0N8R1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav12-1A0N8R1 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav12-1A0N8R1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Celf4-206ENSMUST00000224553 1729 ntBASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12-1A0N8R1 Gm15358-201ENSMUST00000119249 520 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms