Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Gm8318-201ENSMUST00000182954 872 ntBASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Gm33142-201ENSMUST00000193913 867 ntBASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc112A0AUP1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Gm12895-201ENSMUST00000122214 226 ntBASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccdc112A0AUP1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc112A0AUP1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms