Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3854A0A1B0GSS6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm5186-201ENSMUST00000218781 920 ntBASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm3854A0A1B0GSS6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm16026-204ENSMUST00000162652 683 ntBASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm3854A0A1B0GSS6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3854A0A1B0GSS6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm3854A0A1B0GSS6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms