Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Gm14057-201ENSMUST00000120631 482 ntBASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Gm18489-201ENSMUST00000172565 551 ntBASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap99A0A140LIX9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Gm9682-201ENSMUST00000197505 556 ntBASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cfap99A0A140LIX9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Mir1895-201ENSMUST00000122615 79 ntBASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Gm19164-201ENSMUST00000210667 640 ntBASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.16■□□□□ 0.5
Cfap99A0A140LIX9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap99A0A140LIX9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cfap99A0A140LIX9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cfap99A0A140LIX9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cfap99A0A140LIX9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms