Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm27357-201ENSMUST00000183754 135 ntBASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav21-dv12A0A075B6C4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm12895-201ENSMUST00000122214 226 ntBASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm17807-201ENSMUST00000186869 298 ntBASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trav21-dv12A0A075B6C4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm8344-201ENSMUST00000119813 856 ntBASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm12644-201ENSMUST00000119935 606 ntBASIC11.71□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms