Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Mir5131-201ENSMUST00000175426 93 ntBASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Asic1-205ENSMUST00000228185 1818 ntBASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-4A0A075B6B4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Gm9682-201ENSMUST00000197505 556 ntBASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Gm2651-201ENSMUST00000203560 838 ntBASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-4A0A075B6B4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Gm5682-201ENSMUST00000173402 505 ntBASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Gm15590-201ENSMUST00000078419 552 ntBASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-4A0A075B6B4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-4A0A075B6B4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-4A0A075B6B4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms