Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm13312-201ENSMUST00000119631 718 ntBASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm5587-201ENSMUST00000206270 674 ntBASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Gm45328-201ENSMUST00000210942 917 ntBASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav15d-1-dv6d-1A0A075B624 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Efs-202ENSMUST00000227037 2540 ntBASIC12.96□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm9172-201ENSMUST00000212092 954 ntBASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm11950-201ENSMUST00000121615 838 ntBASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm12134-201ENSMUST00000122109 520 ntBASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gm19164-201ENSMUST00000210667 640 ntBASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav15d-1-dv6d-1A0A075B624 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms