Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smarcb1Q9Z0H3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcb1Q9Z0H3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Gm44872-201ENSMUST00000207864 420 ntBASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Dancr-204ENSMUST00000132389 2347 ntBASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcb1Q9Z0H3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcb1Q9Z0H3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms