Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.41□□□□□ -0.26
Nubp1Q9R060 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Gm14539-201ENSMUST00000117527 174 ntBASIC13.41□□□□□ -0.26
Nubp1Q9R060 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Gm5177-201ENSMUST00000183092 997 ntBASIC13.41□□□□□ -0.26
Nubp1Q9R060 Gm27437-201ENSMUST00000183429 107 ntBASIC13.41□□□□□ -0.26
Nubp1Q9R060 Gm45072-201ENSMUST00000208673 929 ntBASIC13.41□□□□□ -0.26
Nubp1Q9R060 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Ap1g1-206ENSMUST00000179104 1096 ntBASIC13.4□□□□□ -0.26
Nubp1Q9R060 Gm10253-201ENSMUST00000194270 940 ntBASIC13.4□□□□□ -0.26
Nubp1Q9R060 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.4□□□□□ -0.26
Nubp1Q9R060 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nubp1Q9R060 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.39□□□□□ -0.27
Nubp1Q9R060 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.39□□□□□ -0.27
Nubp1Q9R060 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Gm12428-201ENSMUST00000119844 727 ntBASIC13.39□□□□□ -0.27
Nubp1Q9R060 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.39□□□□□ -0.27
Nubp1Q9R060 Gm45747-201ENSMUST00000212203 999 ntBASIC13.39□□□□□ -0.27
Nubp1Q9R060 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nubp1Q9R060 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms