Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Gm12085-201ENSMUST00000119263 940 ntBASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim44Q9QXA7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Trim44Q9QXA7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.66■□□□□ 0.42
Trim44Q9QXA7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.66■□□□□ 0.42
Trim44Q9QXA7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Trmt13-210ENSMUST00000198454 880 ntBASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim44Q9QXA7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Gm18666-201ENSMUST00000190039 958 ntBASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim44Q9QXA7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.64■□□□□ 0.42
Trim44Q9QXA7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC17.64■□□□□ 0.42
Trim44Q9QXA7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Trim44Q9QXA7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim44Q9QXA7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim44Q9QXA7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms