Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Mmp1bQ9EPL6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mmp1bQ9EPL6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Gm33142-201ENSMUST00000193913 867 ntBASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Mmp1bQ9EPL6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Mmp1bQ9EPL6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Gm14859-201ENSMUST00000117752 357 ntBASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Mmp1bQ9EPL6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms