Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Gm25990-201ENSMUST00000102440 86 ntBASIC16.75■□□□□ 0.27
Cfap53Q9D439 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.75■□□□□ 0.27
Cfap53Q9D439 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cfap53Q9D439 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.74■□□□□ 0.27
Cfap53Q9D439 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Mir8098-201ENSMUST00000184011 137 ntBASIC16.74■□□□□ 0.27
Cfap53Q9D439 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Cfap53Q9D439 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap53Q9D439 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cfap53Q9D439 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.73■□□□□ 0.27
Cfap53Q9D439 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.73■□□□□ 0.27
Cfap53Q9D439 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Gm6089-201ENSMUST00000197666 938 ntBASIC16.73■□□□□ 0.27
Cfap53Q9D439 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.73■□□□□ 0.27
Cfap53Q9D439 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap53Q9D439 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.72■□□□□ 0.27
Cfap53Q9D439 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cfap53Q9D439 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap53Q9D439 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap53Q9D439 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.71■□□□□ 0.27
Cfap53Q9D439 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap53Q9D439 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap53Q9D439 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cfap53Q9D439 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms