Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Gm7787-201ENSMUST00000216858 688 ntBASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snrnp48Q9D361 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Gm27741-201ENSMUST00000185060 237 ntBASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snrnp48Q9D361 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Snrnp48Q9D361 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Snrnp48Q9D361 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Snrnp48Q9D361 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 354.7 ms