Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ift27Q9D0P8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Gm10052-201ENSMUST00000168019 960 ntBASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Gm44430-201ENSMUST00000203376 995 ntBASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.93□□□□□ -0.18
Ift27Q9D0P8 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.93□□□□□ -0.18
Ift27Q9D0P8 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Gm7729-201ENSMUST00000050143 801 ntBASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift27Q9D0P8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ift27Q9D0P8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Gm21814-202ENSMUST00000203277 873 ntBASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ift27Q9D0P8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms