Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hdhd3Q9CYW4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hdhd3Q9CYW4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hdhd3Q9CYW4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hdhd3Q9CYW4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hdhd3Q9CYW4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hdhd3Q9CYW4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hdhd3Q9CYW4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hdhd3Q9CYW4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Gm37055-201ENSMUST00000191866 133 ntBASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.41□□□□□ -0.42
Hdhd3Q9CYW4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms