Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Gm7284-201ENSMUST00000131667 944 ntBASIC17.95■□□□□ 0.46
Smc3Q9CW03 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.95■□□□□ 0.46
Smc3Q9CW03 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.95■□□□□ 0.46
Smc3Q9CW03 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.94■□□□□ 0.46
Smc3Q9CW03 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smc3Q9CW03 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.94■□□□□ 0.46
Smc3Q9CW03 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.94■□□□□ 0.46
Smc3Q9CW03 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.93■□□□□ 0.46
Smc3Q9CW03 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.93■□□□□ 0.46
Smc3Q9CW03 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smc3Q9CW03 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.92■□□□□ 0.46
Smc3Q9CW03 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.92■□□□□ 0.46
Smc3Q9CW03 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smc3Q9CW03 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.91■□□□□ 0.46
Smc3Q9CW03 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc3Q9CW03 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms