Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Sec61bQ9CQS8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Gm37160-201ENSMUST00000193081 1689 ntBASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Nrn1-204ENSMUST00000224323 1779 ntBASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Gm13410-201ENSMUST00000117058 1415 ntBASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Gm29361-201ENSMUST00000183323 2000 ntBASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Sec61bQ9CQS8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Gm43338-201ENSMUST00000198617 2223 ntBASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Gm15427-201ENSMUST00000117288 531 ntBASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Gm14722-201ENSMUST00000118943 689 ntBASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Rprl2-201ENSMUST00000157150 290 ntBASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Gm7063-201ENSMUST00000186840 981 ntBASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Gm37293-201ENSMUST00000191658 295 ntBASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 Gm43371-201ENSMUST00000202838 1031 ntBASIC8.18□□□□□ -1.1
Sec61bQ9CQS8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms