Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Gm7222-201ENSMUST00000117512 906 ntBASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Gm6550-201ENSMUST00000187574 993 ntBASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Mrpl35Q9CQL6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Mrpl35Q9CQL6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Gm15358-201ENSMUST00000119249 520 ntBASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Gm44771-201ENSMUST00000206975 626 ntBASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Mrpl35Q9CQL6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms