Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Gm13312-201ENSMUST00000119631 718 ntBASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Gm7367-201ENSMUST00000057611 492 ntBASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.41□□□□□ -0.1
Ska1Q9CPV1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska1Q9CPV1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ska1Q9CPV1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Rprl3-201ENSMUST00000157400 290 ntBASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.39□□□□□ -0.11
Ska1Q9CPV1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms