Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh15Q99PJ1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh15Q99PJ1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh15Q99PJ1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh15Q99PJ1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh15Q99PJ1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh15Q99PJ1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh15Q99PJ1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Pcdh15Q99PJ1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm13226-201ENSMUST00000117838 404 ntBASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm8062-201ENSMUST00000139696 444 ntBASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm5354-201ENSMUST00000182417 973 ntBASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm37230-201ENSMUST00000194491 818 ntBASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm5763-201ENSMUST00000155951 1530 ntBASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm7558-201ENSMUST00000193221 1165 ntBASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh15Q99PJ1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh15Q99PJ1 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Mir1247-201ENSMUST00000116706 82 ntBASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Mir1982-201ENSMUST00000157368 74 ntBASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Gm27892-201ENSMUST00000185017 106 ntBASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh15Q99PJ1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh15Q99PJ1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh15Q99PJ1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Pcdh15Q99PJ1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh15Q99PJ1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh15Q99PJ1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh15Q99PJ1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh15Q99PJ1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh15Q99PJ1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms