Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp1b1Q99LU0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp1b1Q99LU0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Grk6-207ENSMUST00000225925 2769 ntBASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chmp1b1Q99LU0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chmp1b1Q99LU0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms