Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm8825-201ENSMUST00000182565 998 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm4518-201ENSMUST00000182638 718 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm5312-201ENSMUST00000203728 547 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc1bQ920F6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smc1bQ920F6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smc1bQ920F6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc1bQ920F6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Mir7023-201ENSMUST00000185093 64 ntBASIC17.56■□□□□ 0.4
Smc1bQ920F6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.56■□□□□ 0.4
Smc1bQ920F6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.56■□□□□ 0.4
Smc1bQ920F6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.56■□□□□ 0.4
Smc1bQ920F6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Smc1bQ920F6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smc1bQ920F6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smc1bQ920F6 Gm17968-201ENSMUST00000194902 784 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms