Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Gm44771-201ENSMUST00000206975 626 ntBASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdha9Q91Y11 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdha9Q91Y11 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdha9Q91Y11 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms