Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb3Q91XZ7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Gm11950-201ENSMUST00000121615 838 ntBASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Gm37722-201ENSMUST00000193757 208 ntBASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Gm6991-201ENSMUST00000218475 1178 ntBASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb3Q91XZ7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb3Q91XZ7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb3Q91XZ7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb3Q91XZ7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms