Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.79□□□□□ -0.36
H1fooQ8VIK3 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.79□□□□□ -0.36
H1fooQ8VIK3 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H1fooQ8VIK3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.78□□□□□ -0.36
H1fooQ8VIK3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H1fooQ8VIK3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
H1fooQ8VIK3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H1fooQ8VIK3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H1fooQ8VIK3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H1fooQ8VIK3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
H1fooQ8VIK3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.77□□□□□ -0.36
H1fooQ8VIK3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H1fooQ8VIK3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H1fooQ8VIK3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms