Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rprd1aQ8VDS4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Gm10499-201ENSMUST00000174094 934 ntBASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rprd1aQ8VDS4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Gm9727-201ENSMUST00000161387 555 ntBASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rprd1aQ8VDS4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rprd1aQ8VDS4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms