Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Gm8318-201ENSMUST00000182954 872 ntBASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lsm1Q8VC85 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Gm12644-201ENSMUST00000119935 606 ntBASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lsm1Q8VC85 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.61□□□□□ -0.07
Lsm1Q8VC85 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms