Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Rpap2Q8VC34 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpap2Q8VC34 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpap2Q8VC34 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Gm18246-201ENSMUST00000221023 728 ntBASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpap2Q8VC34 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms