Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp7Q8R1T1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp7Q8R1T1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Gm9824-201ENSMUST00000178707 561 ntBASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Gm38225-201ENSMUST00000194001 393 ntBASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp7Q8R1T1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Gm15483-201ENSMUST00000120338 456 ntBASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp7Q8R1T1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp7Q8R1T1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms