Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Gm25406-201ENSMUST00000157599 105 ntBASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Gm6623-201ENSMUST00000173570 544 ntBASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nudcd3Q8R1N4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Gm12134-201ENSMUST00000122109 520 ntBASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nudcd3Q8R1N4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.23■□□□□ 0.03
Nudcd3Q8R1N4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms