Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Gm21559-201ENSMUST00000220638 855 ntBASIC9.61□□□□□ -0.87
Cystm1Q8K353 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Gm8587-201ENSMUST00000076538 843 ntBASIC9.61□□□□□ -0.87
Cystm1Q8K353 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Gm43056-201ENSMUST00000197865 2791 ntBASIC9.61□□□□□ -0.87
Cystm1Q8K353 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.61□□□□□ -0.87
Cystm1Q8K353 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.61□□□□□ -0.87
Cystm1Q8K353 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Gm6345-202ENSMUST00000180900 204 ntBASIC9.6□□□□□ -0.87
Cystm1Q8K353 Gm5587-201ENSMUST00000206270 674 ntBASIC9.6□□□□□ -0.87
Cystm1Q8K353 Gm7370-201ENSMUST00000219471 767 ntBASIC9.6□□□□□ -0.87
Cystm1Q8K353 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cystm1Q8K353 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cystm1Q8K353 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms