Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.18■□□□□ 0.34
Syne4Q8CII8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Syne4Q8CII8 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.17■□□□□ 0.34
Syne4Q8CII8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.17■□□□□ 0.34
Syne4Q8CII8 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.17■□□□□ 0.34
Syne4Q8CII8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.17■□□□□ 0.34
Syne4Q8CII8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Gm27533-201ENSMUST00000183800 152 ntBASIC17.17■□□□□ 0.34
Syne4Q8CII8 Gm27838-201ENSMUST00000184829 128 ntBASIC17.17■□□□□ 0.34
Syne4Q8CII8 Gm44344-201ENSMUST00000200287 129 ntBASIC17.17■□□□□ 0.34
Syne4Q8CII8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Gm7775-201ENSMUST00000218871 853 ntBASIC17.17■□□□□ 0.34
Syne4Q8CII8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.17■□□□□ 0.34
Syne4Q8CII8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.17■□□□□ 0.34
Syne4Q8CII8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syne4Q8CII8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Gm27680-201ENSMUST00000184192 160 ntBASIC17.16■□□□□ 0.34
Syne4Q8CII8 Gm9794-201ENSMUST00000202370 423 ntBASIC17.16■□□□□ 0.34
Syne4Q8CII8 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.16■□□□□ 0.34
Syne4Q8CII8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.16■□□□□ 0.34
Syne4Q8CII8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syne4Q8CII8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.15■□□□□ 0.34
Syne4Q8CII8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.15■□□□□ 0.34
Syne4Q8CII8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Syne4Q8CII8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Syne4Q8CII8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Syne4Q8CII8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syne4Q8CII8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syne4Q8CII8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syne4Q8CII8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.14■□□□□ 0.33
Syne4Q8CII8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Syne4Q8CII8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms