Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.67■□□□□ 0.26
Sox30Q8CGW4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.67■□□□□ 0.26
Sox30Q8CGW4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox30Q8CGW4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Gm8097-201ENSMUST00000117903 829 ntBASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Gm27357-201ENSMUST00000183754 135 ntBASIC16.66■□□□□ 0.26
Sox30Q8CGW4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox30Q8CGW4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.65■□□□□ 0.26
Sox30Q8CGW4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox30Q8CGW4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Sox30Q8CGW4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Sybu-209ENSMUST00000228639 4113 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms