Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ShfQ8CG80 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ShfQ8CG80 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.61□□□□□ -0.23
ShfQ8CG80 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ShfQ8CG80 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.61□□□□□ -0.23
ShfQ8CG80 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.61□□□□□ -0.23
ShfQ8CG80 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ShfQ8CG80 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
ShfQ8CG80 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.61□□□□□ -0.23
ShfQ8CG80 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.61□□□□□ -0.23
ShfQ8CG80 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShfQ8CG80 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.6□□□□□ -0.23
ShfQ8CG80 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.6□□□□□ -0.23
ShfQ8CG80 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShfQ8CG80 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Gm27357-201ENSMUST00000183754 135 ntBASIC13.59□□□□□ -0.23
ShfQ8CG80 Gm27704-201ENSMUST00000185094 107 ntBASIC13.59□□□□□ -0.23
ShfQ8CG80 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ShfQ8CG80 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.59□□□□□ -0.23
ShfQ8CG80 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.59□□□□□ -0.23
ShfQ8CG80 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.59□□□□□ -0.23
ShfQ8CG80 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.59□□□□□ -0.23
ShfQ8CG80 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShfQ8CG80 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
ShfQ8CG80 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ShfQ8CG80 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ShfQ8CG80 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.23
ShfQ8CG80 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
ShfQ8CG80 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ShfQ8CG80 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ShfQ8CG80 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.58□□□□□ -0.23
ShfQ8CG80 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ShfQ8CG80 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
ShfQ8CG80 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShfQ8CG80 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ShfQ8CG80 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms