Protein–RNA interactions for Protein: Q8CEQ0

Cdkl1, Cyclin-dependent kinase-like 1, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl1Q8CEQ0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdkl1Q8CEQ0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.47□□□□□ -0.09
Cdkl1Q8CEQ0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Gm9682-201ENSMUST00000197505 556 ntBASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkl1Q8CEQ0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkl1Q8CEQ0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkl1Q8CEQ0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkl1Q8CEQ0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkl1Q8CEQ0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkl1Q8CEQ0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkl1Q8CEQ0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Gm5682-201ENSMUST00000173402 505 ntBASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Gm6376-201ENSMUST00000209407 580 ntBASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdkl1Q8CEQ0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms