Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col6a6Q8C6K9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Gm18187-201ENSMUST00000196476 984 ntBASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Gm15487-201ENSMUST00000122373 465 ntBASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Gm27920-201ENSMUST00000183953 96 ntBASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a6Q8C6K9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Gm6415-201ENSMUST00000118488 348 ntBASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a6Q8C6K9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Gm18766-201ENSMUST00000189811 808 ntBASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col6a6Q8C6K9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a6Q8C6K9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.71□□□□□ -0.22
Col6a6Q8C6K9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col6a6Q8C6K9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms