Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vps9d1Q8C190 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Gm27357-201ENSMUST00000183754 135 ntBASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps9d1Q8C190 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps9d1Q8C190 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps9d1Q8C190 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Rprl3-201ENSMUST00000157400 290 ntBASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps9d1Q8C190 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms