Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Gm14140-201ENSMUST00000119999 995 ntBASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nek11Q8C0Q4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nek11Q8C0Q4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Gm13597-201ENSMUST00000121239 375 ntBASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nek11Q8C0Q4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Gm44771-201ENSMUST00000206975 626 ntBASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nek11Q8C0Q4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.02■□□□□ 0.47
Nek11Q8C0Q4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nek11Q8C0Q4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nek11Q8C0Q4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nek11Q8C0Q4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nek11Q8C0Q4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nek11Q8C0Q4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nek11Q8C0Q4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nek11Q8C0Q4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nek11Q8C0Q4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms