Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdhr3Q8BL00 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdhr3Q8BL00 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 AA414768-201ENSMUST00000121924 1257 ntBASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Gm18622-201ENSMUST00000219361 595 ntBASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdhr3Q8BL00 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Gm25745-201ENSMUST00000174945 133 ntBASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Gm27742-201ENSMUST00000184667 60 ntBASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdhr3Q8BL00 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms