Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nop53Q8BK35 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nop53Q8BK35 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.34■□□□□ 0.21
Nop53Q8BK35 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.34■□□□□ 0.21
Nop53Q8BK35 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nop53Q8BK35 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nop53Q8BK35 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Nop53Q8BK35 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nop53Q8BK35 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nop53Q8BK35 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Gm34391-201ENSMUST00000203706 907 ntBASIC16.33■□□□□ 0.2
Nop53Q8BK35 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.33■□□□□ 0.2
Nop53Q8BK35 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nop53Q8BK35 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms