Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc5a7Q8BGY9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Gm2274-201ENSMUST00000184539 609 ntBASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc5a7Q8BGY9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc5a7Q8BGY9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms