Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nucks1Q80XU3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nucks1Q80XU3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Gm15358-201ENSMUST00000119249 520 ntBASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nucks1Q80XU3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Gm18669-201ENSMUST00000216049 778 ntBASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nucks1Q80XU3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nucks1Q80XU3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms