Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Gm9103-201ENSMUST00000119371 405 ntBASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ctdp1Q7TSG2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ctdp1Q7TSG2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ctdp1Q7TSG2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Ctdp1Q7TSG2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ctdp1Q7TSG2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Gm15794-201ENSMUST00000120182 631 ntBASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Mir3081-201ENSMUST00000175305 84 ntBASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Gm18669-201ENSMUST00000216049 778 ntBASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.63■□□□□ 0.25
Ctdp1Q7TSG2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctdp1Q7TSG2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms