Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.08■□□□□ 0
Trappc6aQ78XR0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trappc6aQ78XR0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.07■□□□□ 0
Trappc6aQ78XR0 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.07■□□□□ 0
Trappc6aQ78XR0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trappc6aQ78XR0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.06■□□□□ 0
Trappc6aQ78XR0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trappc6aQ78XR0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trappc6aQ78XR0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trappc6aQ78XR0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trappc6aQ78XR0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trappc6aQ78XR0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trappc6aQ78XR0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trappc6aQ78XR0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trappc6aQ78XR0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trappc6aQ78XR0 Gm6973-201ENSMUST00000117080 721 ntBASIC15.05■□□□□ -0
Trappc6aQ78XR0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.05■□□□□ -0
Trappc6aQ78XR0 Mir6977-201ENSMUST00000184960 64 ntBASIC15.05■□□□□ -0
Trappc6aQ78XR0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trappc6aQ78XR0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trappc6aQ78XR0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trappc6aQ78XR0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.05■□□□□ -0
Trappc6aQ78XR0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trappc6aQ78XR0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.05■□□□□ -0
Trappc6aQ78XR0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trappc6aQ78XR0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.04■□□□□ -0
Trappc6aQ78XR0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Gm25287-201ENSMUST00000103846 110 ntBASIC15.04■□□□□ -0
Trappc6aQ78XR0 Gm22918-201ENSMUST00000103855 110 ntBASIC15.04■□□□□ -0
Trappc6aQ78XR0 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.04■□□□□ -0
Trappc6aQ78XR0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Gm11543-201ENSMUST00000120758 370 ntBASIC15.04■□□□□ -0
Trappc6aQ78XR0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.04■□□□□ -0
Trappc6aQ78XR0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trappc6aQ78XR0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms