Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vma21Q78T54 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vma21Q78T54 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.43□□□□□ -0.42
Vma21Q78T54 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.43□□□□□ -0.42
Vma21Q78T54 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vma21Q78T54 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.42□□□□□ -0.42
Vma21Q78T54 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.42□□□□□ -0.42
Vma21Q78T54 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vma21Q78T54 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vma21Q78T54 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.42□□□□□ -0.42
Vma21Q78T54 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21Q78T54 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vma21Q78T54 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Vma21Q78T54 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Vma21Q78T54 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.41□□□□□ -0.42
Vma21Q78T54 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.41□□□□□ -0.42
Vma21Q78T54 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Vma21Q78T54 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.41□□□□□ -0.42
Vma21Q78T54 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vma21Q78T54 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.4□□□□□ -0.42
Vma21Q78T54 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Vma21Q78T54 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Vma21Q78T54 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vma21Q78T54 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms