Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Ddx55Q6ZPL9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Gm15321-201ENSMUST00000121290 288 ntBASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx55Q6ZPL9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx55Q6ZPL9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Gm9794-201ENSMUST00000202370 423 ntBASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx55Q6ZPL9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Gm12490-201ENSMUST00000120255 560 ntBASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx55Q6ZPL9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Gm24694-201ENSMUST00000180054 110 ntBASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Gm27663-201ENSMUST00000184839 110 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms