Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Dhx40Q6PE54 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.97■□□□□ 0.31
Dhx40Q6PE54 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Dhx40Q6PE54 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Mir3081-201ENSMUST00000175305 84 ntBASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Dhx40Q6PE54 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.96■□□□□ 0.3
Dhx40Q6PE54 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Dhx40Q6PE54 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Dhx40Q6PE54 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.96■□□□□ 0.3
Dhx40Q6PE54 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Dhx40Q6PE54 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Dhx40Q6PE54 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Dhx40Q6PE54 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Carlr-201ENSMUST00000181515 2574 ntBASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Olfr129-201ENSMUST00000122318 993 ntBASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.95■□□□□ 0.3
Dhx40Q6PE54 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Gm44454-201ENSMUST00000198541 138 ntBASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Gm18622-201ENSMUST00000219361 595 ntBASIC16.94■□□□□ 0.3
Dhx40Q6PE54 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Dhx40Q6PE54 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Gm9103-201ENSMUST00000119371 405 ntBASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dhx40Q6PE54 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.93■□□□□ 0.3
Dhx40Q6PE54 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.92■□□□□ 0.3
Dhx40Q6PE54 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms